STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139WMR0Protein roadkill-like Protein. (894 aa)    
Predicted Functional Partners:
D6WNA9_TRICA
Cullin homolog 1-like Protein; Belongs to the cullin family.
   
 0.971
Lwr
Lesswright; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.937
D6WSD5_TRICA
Cullin homolog 1-like Protein; Belongs to the cullin family.
   
 0.873
Ci
Cubitus interruptus.
   
 0.862
D2A690_TRICA
Transcriptional activator cubitus interruptus-like Protein.
   
 0.807
D2A2S1_TRICA
RING-box protein 1A-like Protein.
    
 0.715
D6WVV0_TRICA
Geminin-like Protein.
    
   0.618
Pub
Polyubiquitin-like Protein.
    
 0.580
KATNA1
Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.
   
 0.562
D6WV93_TRICA
annotation not available
   
 
 0.561
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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