STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139WNL0Transcription elongation regulator 1-like Protein. (1118 aa)    
Predicted Functional Partners:
D6WA67_TRICA
Microfibrillar-associated protein 1-like Protein.
   
 0.995
D6WU66_TRICA
Pre-mRNA-splicing factor 38A-like Protein.
   
 0.991
D6X2W1_TRICA
Zinc finger matrin-type protein 2-like Protein.
    
  0.989
A0A139WC93
Splicing factor 3B subunit 1-like Protein.
   
 
 0.983
D6WB22_TRICA
Splicing factor 3A subunit 1-like Protein.
   
   0.982
D6X367_TRICA
Putative U2 small nuclear ribonucleoprotein A'-like Protein.
   
 
 0.982
D6WDW9_TRICA
Splicing factor 3B subunit 4-like Protein.
    
 
 0.981
D6WWM5_TRICA
Pre-mRNA-splicing factor RBM22-like Protein.
   
 0.979
D6WD19_TRICA
Puff-specific protein Bx42-like Protein.
   
 0.978
D6X4C5_TRICA
Cell division cycle 5-like protein.
   
  0.978
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.