STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2A2U3_TRICADNA polymerase subunit gamma-1, mitochondrial-like Protein. (1118 aa)    
Predicted Functional Partners:
A0A139WDR4
Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family.
   
 
 0.964
A0A139WHY9
Glycine--tRNA ligase-like Protein.
   
 
 0.783
D2A2D3_TRICA
Single-stranded DNA-binding protein, mitochondrial-like Protein.
   
 
 0.742
D6X0G8_TRICA
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
 
 0.737
D6WGI5_TRICA
Twinkle protein, mitochondrial-like Protein.
   
  
 0.712
D6WV01_TRICA
Transcription factor A, mitochondrial-like Protein.
    
 
 0.710
D2A042_TRICA
Triosephosphate isomerase.
    
 0.706
D6WV41_TRICA
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
   
  
 0.694
Mre11
Meiotic recombination 11; Belongs to the MRE11/RAD32 family.
   
 0.650
D6WWX6_TRICA
Peptide methionine sulfoxide reductase-like Protein.
   
  
 0.610
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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