D2A4Z1_TRICA protein (Tribolium castaneum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

D2A4Z1_TRICA

Protein FAM57B-like Protein. (328 aa)

Predicted Functional Partners:

A0A139WGK9

0.705

A0A139WCI0

0.650

A0A139WGX2

0.593

D6W847_TRICA

0.578

D6X254_TRICA

0.542

D1ZZL7_TRICA

0.532

D6W719_TRICA

0.525

D6WA45_TRICA

0.519

D2A0B8_TRICA

0.485

D6WWX7_TRICA

0.483

Your Current Organism:

Tribolium castaneum

NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A139WCI0	A0A139WGX2	A0A139WCI0	A0A139WGX2	Uncharacterized protein.	Uncharacterized protein.	0.585
A0A139WCI0	D1ZZL7_TRICA	A0A139WCI0	D1ZZL7	Uncharacterized protein.	Protein dpy-30 homolog-like Protein.	0.648
A0A139WCI0	D2A0B8_TRICA	A0A139WCI0	D2A0B8	Uncharacterized protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.485
A0A139WCI0	D2A4Z1_TRICA	A0A139WCI0	D2A4Z1	Uncharacterized protein.	Protein FAM57B-like Protein.	0.650
A0A139WCI0	D6W719_TRICA	A0A139WCI0	D6W719	Uncharacterized protein.	Guanylate kinase-like Protein.	0.535
A0A139WCI0	D6WA45_TRICA	A0A139WCI0	D6WA45	Uncharacterized protein.	c-Myc-binding protein homolog-like Protein.	0.501
A0A139WGK9	D2A4Z1_TRICA	A0A139WGK9	D2A4Z1	Protein strawberry notch-like protein.	Protein FAM57B-like Protein.	0.705
A0A139WGX2	A0A139WCI0	A0A139WGX2	A0A139WCI0	Uncharacterized protein.	Uncharacterized protein.	0.585
A0A139WGX2	D1ZZL7_TRICA	A0A139WGX2	D1ZZL7	Uncharacterized protein.	Protein dpy-30 homolog-like Protein.	0.741
A0A139WGX2	D2A0B8_TRICA	A0A139WGX2	D2A0B8	Uncharacterized protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.485
A0A139WGX2	D2A4Z1_TRICA	A0A139WGX2	D2A4Z1	Uncharacterized protein.	Protein FAM57B-like Protein.	0.593
A0A139WGX2	D6W719_TRICA	A0A139WGX2	D6W719	Uncharacterized protein.	Guanylate kinase-like Protein.	0.525
A0A139WGX2	D6WA45_TRICA	A0A139WGX2	D6WA45	Uncharacterized protein.	c-Myc-binding protein homolog-like Protein.	0.554
D1ZZL7_TRICA	A0A139WCI0	D1ZZL7	A0A139WCI0	Protein dpy-30 homolog-like Protein.	Uncharacterized protein.	0.648
D1ZZL7_TRICA	A0A139WGX2	D1ZZL7	A0A139WGX2	Protein dpy-30 homolog-like Protein.	Uncharacterized protein.	0.741
D1ZZL7_TRICA	D2A0B8_TRICA	D1ZZL7	D2A0B8	Protein dpy-30 homolog-like Protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.485
D1ZZL7_TRICA	D2A4Z1_TRICA	D1ZZL7	D2A4Z1	Protein dpy-30 homolog-like Protein.	Protein FAM57B-like Protein.	0.532
D1ZZL7_TRICA	D6W719_TRICA	D1ZZL7	D6W719	Protein dpy-30 homolog-like Protein.	Guanylate kinase-like Protein.	0.655
D2A0B8_TRICA	A0A139WCI0	D2A0B8	A0A139WCI0	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.485
D2A0B8_TRICA	A0A139WGX2	D2A0B8	A0A139WGX2	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.485