STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D6WAF8_TRICAUncharacterized protein. (238 aa)    
Predicted Functional Partners:
Lig4
DNA ligase 4-like protein; Belongs to the ATP-dependent DNA ligase family.
    
 0.959
Lig4-2
Ligase4-like protein; Belongs to the ATP-dependent DNA ligase family.
    
 0.959
Irbp
Inverted repeat-binding protein.
    
 0.950
D6WBH3_TRICA
DNA-dependent protein kinase catalytic subunit-like Protein; Belongs to the PI3/PI4-kinase family.
    
 0.948
A0A139WGH8
Uncharacterized protein.
    
 0.921
D6WLA5_TRICA
X-ray repair cross-complementing protein 5-like Protein.
    
 0.921
D6WZE5_TRICA
Protein artemis-like Protein.
   
 
 0.763
D6X4D6_TRICA
DNA excision repair protein ERCC-1-like Protein.
     
 0.590
D6W723_TRICA
Putative DNA mismatch repair protein Msh6-like Protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
 
 0.571
D7EIT9_TRICA
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
 
 0.566
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.