D6WCX3_TRICA protein (Tribolium castaneum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

D6WCX3_TRICA

Tubulin beta-3 chain-like Protein; Belongs to the tubulin family. (459 aa)

Predicted Functional Partners:

D6X3L3_TRICA

0.812

D6WA18_TRICA

0.786

D6WBF0_TRICA

0.784

D6X4W2_TRICA

0.784

D6WBL0_TRICA

0.782

Tub84B

0.782

Msps

0.717

D6X2P2_TRICA

0.712

D6X2P5_TRICA

0.712

D6WU92_TRICA

0.688

Your Current Organism:

Tribolium castaneum

NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D6WA18_TRICA	D6WBF0_TRICA	D6WA18	D6WBF0	Leucine-rich repeat serine/threonine-protein kinase 1-like Protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.872
D6WA18_TRICA	D6WBL0_TRICA	D6WA18	D6WBL0	Leucine-rich repeat serine/threonine-protein kinase 1-like Protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.872
D6WA18_TRICA	D6WCX3_TRICA	D6WA18	D6WCX3	Leucine-rich repeat serine/threonine-protein kinase 1-like Protein.	Tubulin beta-3 chain-like Protein; Belongs to the tubulin family.	0.786
D6WA18_TRICA	D6X3L3_TRICA	D6WA18	D6X3L3	Leucine-rich repeat serine/threonine-protein kinase 1-like Protein.	Serine/threonine-protein kinase CG17528-like Protein.	0.499
D6WA18_TRICA	D6X4W2_TRICA	D6WA18	D6X4W2	Leucine-rich repeat serine/threonine-protein kinase 1-like Protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.872
D6WA18_TRICA	Tub84B	D6WA18	D6WBN7	Leucine-rich repeat serine/threonine-protein kinase 1-like Protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.872
D6WBF0_TRICA	D6WA18_TRICA	D6WBF0	D6WA18	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Leucine-rich repeat serine/threonine-protein kinase 1-like Protein.	0.872
D6WBF0_TRICA	D6WCX3_TRICA	D6WBF0	D6WCX3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta-3 chain-like Protein; Belongs to the tubulin family.	0.784
D6WBF0_TRICA	D6WU92_TRICA	D6WBF0	D6WU92	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Microtubule-associated protein RP/EB family member 1-like Protein.	0.751
D6WBF0_TRICA	D6X2P2_TRICA	D6WBF0	D6X2P2	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Echinoderm microtubule-associated protein-like CG42247.	0.681
D6WBF0_TRICA	D6X2P5_TRICA	D6WBF0	D6X2P5	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Echinoderm microtubule-associated protein-like CG42247.	0.681
D6WBF0_TRICA	D6X3L3_TRICA	D6WBF0	D6X3L3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Serine/threonine-protein kinase CG17528-like Protein.	0.860
D6WBF0_TRICA	Msps	D6WBF0	D6WD03	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Mini spindles.	0.739
D6WBL0_TRICA	D6WA18_TRICA	D6WBL0	D6WA18	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Leucine-rich repeat serine/threonine-protein kinase 1-like Protein.	0.872
D6WBL0_TRICA	D6WCX3_TRICA	D6WBL0	D6WCX3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta-3 chain-like Protein; Belongs to the tubulin family.	0.782
D6WBL0_TRICA	D6WU92_TRICA	D6WBL0	D6WU92	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Microtubule-associated protein RP/EB family member 1-like Protein.	0.751
D6WBL0_TRICA	D6X2P2_TRICA	D6WBL0	D6X2P2	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Echinoderm microtubule-associated protein-like CG42247.	0.681
D6WBL0_TRICA	D6X2P5_TRICA	D6WBL0	D6X2P5	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Echinoderm microtubule-associated protein-like CG42247.	0.681
D6WBL0_TRICA	D6X3L3_TRICA	D6WBL0	D6X3L3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Serine/threonine-protein kinase CG17528-like Protein.	0.860
D6WBL0_TRICA	Msps	D6WBL0	D6WD03	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Mini spindles.	0.739