D6WFS2_TRICA protein (Tribolium castaneum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

D6WFS2_TRICA

Neurogenic differentiation factor 1-like Protein. (205 aa)

Predicted Functional Partners:

A0A139WCX1

0.718

A0A139WEE5

0.697

D6WQ63_TRICA

0.586

A0A139WL58

0.561

A0A139WCI6

0.491

Tc-vnd

0.467

Wnt9

0.459

A0A139WJB5

0.453

HR3

0.444

D6WTB9_TRICA

0.444

Your Current Organism:

Tribolium castaneum

NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A139WCI6	D6WFS2_TRICA	A0A139WCI6	D6WFS2	Uncharacterized protein.	Neurogenic differentiation factor 1-like Protein.	0.491
A0A139WCX1	D6WFS2_TRICA	A0A139WCX1	D6WFS2	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	Neurogenic differentiation factor 1-like Protein.	0.718
A0A139WEE5	D6WFS2_TRICA	A0A139WEE5	D6WFS2	Transcription factor E2-alpha-like Protein.	Neurogenic differentiation factor 1-like Protein.	0.697
A0A139WJB5	D6WFS2_TRICA	A0A139WJB5	D6WFS2	Paired box protein Pax-6-like Protein.	Neurogenic differentiation factor 1-like Protein.	0.453
A0A139WL58	D6WFS2_TRICA	A0A139WL58	D6WFS2	Protein pangolin, isoforms A/H/I/S-like Protein.	Neurogenic differentiation factor 1-like Protein.	0.561
D6WFS2_TRICA	A0A139WCI6	D6WFS2	A0A139WCI6	Neurogenic differentiation factor 1-like Protein.	Uncharacterized protein.	0.491
D6WFS2_TRICA	A0A139WCX1	D6WFS2	A0A139WCX1	Neurogenic differentiation factor 1-like Protein.	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	0.718
D6WFS2_TRICA	A0A139WEE5	D6WFS2	A0A139WEE5	Neurogenic differentiation factor 1-like Protein.	Transcription factor E2-alpha-like Protein.	0.697
D6WFS2_TRICA	A0A139WJB5	D6WFS2	A0A139WJB5	Neurogenic differentiation factor 1-like Protein.	Paired box protein Pax-6-like Protein.	0.453
D6WFS2_TRICA	A0A139WL58	D6WFS2	A0A139WL58	Neurogenic differentiation factor 1-like Protein.	Protein pangolin, isoforms A/H/I/S-like Protein.	0.561
D6WFS2_TRICA	D6WQ63_TRICA	D6WFS2	D6WQ63	Neurogenic differentiation factor 1-like Protein.	Insulinoma-associated protein 1a-like Protein.	0.586
D6WFS2_TRICA	D6WTB9_TRICA	D6WFS2	D6WTB9	Neurogenic differentiation factor 1-like Protein.	Furin-like protease 1, isoforms 1/1-X/2; Belongs to the peptidase S8 family.	0.444
D6WFS2_TRICA	HR3	D6WFS2	D6WQH4	Neurogenic differentiation factor 1-like Protein.	Hormone receptor in 46-like protein.	0.444
D6WFS2_TRICA	Tc-vnd	D6WFS2	D2A2S4	Neurogenic differentiation factor 1-like Protein.	Homeobox protein vnd-like Protein.	0.467
D6WFS2_TRICA	Wnt9	D6WFS2	D6WK65	Neurogenic differentiation factor 1-like Protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.459
D6WQ63_TRICA	D6WFS2_TRICA	D6WQ63	D6WFS2	Insulinoma-associated protein 1a-like Protein.	Neurogenic differentiation factor 1-like Protein.	0.586
D6WTB9_TRICA	D6WFS2_TRICA	D6WTB9	D6WFS2	Furin-like protease 1, isoforms 1/1-X/2; Belongs to the peptidase S8 family.	Neurogenic differentiation factor 1-like Protein.	0.444
HR3	D6WFS2_TRICA	D6WQH4	D6WFS2	Hormone receptor in 46-like protein.	Neurogenic differentiation factor 1-like Protein.	0.444
Tc-vnd	D6WFS2_TRICA	D2A2S4	D6WFS2	Homeobox protein vnd-like Protein.	Neurogenic differentiation factor 1-like Protein.	0.467
Wnt9	D6WFS2_TRICA	D6WK65	D6WFS2	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Neurogenic differentiation factor 1-like Protein.	0.459