STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D6WGW8_TRICANegative elongation factor D-like Protein. (578 aa)    
Predicted Functional Partners:
D6X2R9_TRICA
Negative elongation factor A-like Protein.
    
 0.997
D6WGY9_TRICA
Negative elongation factor B-like Protein.
   
 0.996
D6WEE5_TRICA
Negative elongation factor E-like Protein.
    
 0.994
D2A605_TRICA
Transcription elongation factor SPT5.
    
 0.963
D6WVM1_TRICA
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.952
D6WKF8_TRICA
Putative methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like Protein.
  
 0.931
D6WSM9_TRICA
Putative methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like Protein.
  
 0.931
D6WRF4_TRICA
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.915
D6WZP4_TRICA
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.889
D6WKM1_TRICA
DNA-directed RNA polymerase II subunit RPB3-like Protein.
    
 0.864
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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