STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D6WKN2_TRICAPre-mRNA-splicing factor SPF27-like Protein. (219 aa)    
Predicted Functional Partners:
A0A139WBN5
Uncharacterized protein.
   
 0.999
D6WA47_TRICA
Protein will die slowly-like Protein.
   
 0.999
D6X4C5_TRICA
Cell division cycle 5-like protein.
   
 0.999
D6WLQ5_TRICA
Protein CWC15 homolog-like Protein.
   
 0.992
D6X3W5_TRICA
Pre-mRNA-processing factor 17-like Protein.
   
 
 0.991
GLEAN_10565
MPN domain-containing protein.
    
 
 0.987
A0A139WHY2
Pre-mRNA-splicing factor SYF1-like Protein.
    
 0.985
D6WUJ3_TRICA
Elongation factor 2-like Protein.
   
 
 0.981
D6WDW9_TRICA
Splicing factor 3B subunit 4-like Protein.
   
   0.974
D6WYC4_TRICA
Protein will die slowly-like Protein.
   
 
 0.970
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.