STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D6WPL3_TRICAProtein Aatf-like Protein. (476 aa)    
Predicted Functional Partners:
D1ZZM0_TRICA
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.999
D6WUM6_TRICA
Uncharacterized protein.
   
 
 0.999
D6WZW5_TRICA
Nucleolar protein 14 homolog-like Protein.
   
 
 0.999
D6WM93_TRICA
Nucleolar protein 10-like Protein.
   
 
 0.998
D6W8S8_TRICA
POC1 centriolar protein homolog-like Protein.
   
   0.997
D6WAZ0_TRICA
WD repeat-containing protein 46-like Protein.
   
 
 0.997
D6WFF9_TRICA
WD repeat-containing protein 43-like Protein.
   
 
 0.997
D6WLZ7_TRICA
Neuroguidin-A-like Protein.
   
 
 0.997
D6WW17_TRICA
Ribosome biogenesis protein BMS1 homolog-like Protein.
   
 
 0.997
D6WBP4_TRICA
U3 small nucleolar RNA-associated protein 18 homolog-like Protein.
   
 
 0.996
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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