STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D6WSG0_TRICAUncharacterized protein. (425 aa)    
Predicted Functional Partners:
USP7
Ubiquitin carboxyl-terminal hydrolase 7-like Protein; Belongs to the peptidase C19 family.
    
 0.957
D6WP72_TRICA
Helicase ARIP4-like Protein.
    
 0.951
D6WPP9_TRICA
Transcriptional regulator ATRX homolog-like Protein.
    
 0.951
D2A1I6_TRICA
PHD-type domain-containing protein.
    
 0.888
A0A139WMU9
Uncharacterized protein.
    
 0.833
D6WER3_TRICA
Small ubiquitin-related modifier.
    
 0.809
Lwr
Lesswright; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.800
A0A139WMY0
Mitogen-activated protein kinase kinase kinase 15-like Protein.
    
 
 0.788
D1ZZH6_TRICA
Homeodomain-interacting protein kinase 2-like Protein.
    
 
 0.740
D6WMX8_TRICA
ULP_PROTEASE domain-containing protein.
    
 
 0.707
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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