STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D6WVN1_TRICACDK5RAP1-like protein. (610 aa)    
Predicted Functional Partners:
D6WZ05_TRICA
Exosome complex component RRP40-like Protein.
    
 
 0.957
D6WTI2_TRICA
Exosome complex component RRP46-like Protein.
   
   0.933
D2A466_TRICA
Pre-mRNA-processing factor 40 homolog A-like Protein.
 
 
    0.883
A0A139WPD2
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 
 0.874
D6WDB1_TRICA
tRNA dimethylallyltransferase, mitochondrial-like Protein; Belongs to the IPP transferase family.
  
  
 0.649
D6WQI2_TRICA
Transcription initiation factor TFIID subunit 8-like Protein.
 
      0.649
D6WSD8_TRICA
Mitochondrial tRNA-specific 2-thiouridylase 1-like Protein.
  
  
 0.636
D2A2K7_TRICA
Mitochondrial inner membrane protease subunit.
 
    0.617
D6WDT2_TRICA
28S ribosomal protein S9, mitochondrial-like Protein.
  
  
 0.594
D6WBQ5_TRICA
Ribosome-recycling factor, mitochondrial-like Protein.
  
  
 0.585
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.