Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arp1 | Arp11 | D6WVY4 | D2A134 | Actin-5C-like Protein. | Actin-57B-like Protein; Belongs to the actin family. | 0.786 |
Arp1 | D6WDF4_TRICA | D6WVY4 | D6WDF4 | Actin-5C-like Protein. | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | 0.751 |
Arp1 | D6WFR9_TRICA | D6WVY4 | D6WFR9 | Actin-5C-like Protein. | Cofilin/actin-depolymerizing factor homolog-like Protein; Belongs to the actin-binding proteins ADF family. | 0.770 |
Arp1 | D6WGX8_TRICA | D6WVY4 | D6WGX8 | Actin-5C-like Protein. | Actin-related protein 3-like Protein; Belongs to the actin family. | 0.752 |
Arp1 | D6X069_TRICA | D6WVY4 | D6X069 | Actin-5C-like Protein. | Uncharacterized protein. | 0.900 |
Arp1 | D6X384_TRICA | D6WVY4 | D6X384 | Actin-5C-like Protein. | Histone H2A deubiquitinase MYSM1-like Protein. | 0.857 |
Arp1 | D7EII7_TRICA | D6WVY4 | D7EII7 | Actin-5C-like Protein. | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | 0.770 |
Arp1 | Dctn2 | D6WVY4 | D6X161 | Actin-5C-like Protein. | Putative dynactin subunit 2-like Protein. | 0.776 |
Arp1 | Dctn4 | D6WVY4 | D6X4D7 | Actin-5C-like Protein. | Dynactin subunit 4-like Protein. | 0.764 |
Arp1 | Myo21 | D6WVY4 | D6WK70 | Actin-5C-like Protein. | Neither inactivation nor afterpotential protein C-like Protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.928 |
Arp11 | Arp1 | D2A134 | D6WVY4 | Actin-57B-like Protein; Belongs to the actin family. | Actin-5C-like Protein. | 0.786 |
Arp11 | D6WDF4_TRICA | D2A134 | D6WDF4 | Actin-57B-like Protein; Belongs to the actin family. | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | 0.760 |
Arp11 | D6WFR9_TRICA | D2A134 | D6WFR9 | Actin-57B-like Protein; Belongs to the actin family. | Cofilin/actin-depolymerizing factor homolog-like Protein; Belongs to the actin-binding proteins ADF family. | 0.522 |
Arp11 | D6WGX8_TRICA | D2A134 | D6WGX8 | Actin-57B-like Protein; Belongs to the actin family. | Actin-related protein 3-like Protein; Belongs to the actin family. | 0.812 |
Arp11 | D6X384_TRICA | D2A134 | D6X384 | Actin-57B-like Protein; Belongs to the actin family. | Histone H2A deubiquitinase MYSM1-like Protein. | 0.857 |
Arp11 | D7EII7_TRICA | D2A134 | D7EII7 | Actin-57B-like Protein; Belongs to the actin family. | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | 0.807 |
Arp11 | Dctn2 | D2A134 | D6X161 | Actin-57B-like Protein; Belongs to the actin family. | Putative dynactin subunit 2-like Protein. | 0.998 |
Arp11 | Dctn4 | D2A134 | D6X4D7 | Actin-57B-like Protein; Belongs to the actin family. | Dynactin subunit 4-like Protein. | 0.997 |
D6WDF4_TRICA | Arp1 | D6WDF4 | D6WVY4 | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | Actin-5C-like Protein. | 0.751 |
D6WDF4_TRICA | Arp11 | D6WDF4 | D2A134 | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | Actin-57B-like Protein; Belongs to the actin family. | 0.760 |
page 1 of 4