STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D6X0Q7_TRICAVPS9 domain-containing protein. (298 aa)    
Predicted Functional Partners:
D6WYD4_TRICA
Uncharacterized protein.
    
 0.848
D2A138_TRICA
Vesicle-associated membrane protein 7-like Protein.
    
 0.795
D2A6E5_TRICA
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.717
D6WE58_TRICA
Ras-related protein Rab6-like Protein.
    
 0.667
Rab5
Rab-protein 5.
    
 0.646
D6WRD4_TRICA
Ras-related protein Rab6-like Protein.
    
 0.646
D6WRD5_TRICA
Ras-related protein Rab-26-like Protein.
    
 0.646
D6WJR6_TRICA
Alsin-like Protein.
    
 0.532
D6WWI2_TRICA
Uncharacterized protein.
    
 0.524
D7EIS2_TRICA
Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.512
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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