STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D6X2L5_TRICAU4/U6 small nuclear ribonucleoprotein Prp31-like Protein. (496 aa)    
Predicted Functional Partners:
D6WBF5_TRICA
U4/U6 small nuclear ribonucleoprotein Prp4-like Protein.
   
 0.998
D6WBT3_TRICA
U4/U6 small nuclear ribonucleoprotein Prp3-like Protein.
   
 0.998
D6WHE4_TRICA
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 0.998
D6WZU4_TRICA
Uncharacterized protein.
   
 0.998
D6WW85_TRICA
Pre-mRNA-processing factor 6-like Protein.
   
 0.997
LSM8
U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.996
D6WUJ3_TRICA
Elongation factor 2-like Protein.
   
 0.996
GLEAN_10565
MPN domain-containing protein.
    
 0.995
A0A139WNM0
Putative U5 small nuclear ribonucleoprotein 200 kDa helicase-like Protein.
    
 0.994
Txnl4a
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
 0.992
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.