STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D6X4C4_TRICAUbiquitin thioesterase OTU1-like Protein. (300 aa)    
Predicted Functional Partners:
D6X170_TRICA
Phospholipase A-2-activating protein-like Protein.
    
 
 0.980
D2A587_TRICA
Ubiquitin fusion degradation protein 1 homolog-like Protein.
   
 
 0.978
D6WT40_TRICA
NSFL1 cofactor p47-like Protein.
   
 
 0.975
Pub
Polyubiquitin-like Protein.
    
 
 0.967
D6X2L3_TRICA
Gamma-glutamylcyclotransferase-like Protein.
    
 
 0.935
D2A1M7_TRICA
Transitional endoplasmic reticulum ATPase TER94-like Protein.
   
 0.924
TER94
Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.
   
 0.924
D6WWC9_TRICA
Ubiquitin conjugation factor E4 B-like Protein.
    
 
 0.898
D6WFJ1_TRICA
Ubiquitin conjugation factor E4 A-like Protein.
    
 
 0.872
D2A1G0_TRICA
Ubiquitin-60S ribosomal protein L40-like Protein.
    
   0.859
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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