STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7EKH6_TRICAIntegrase catalytic domain-containing protein. (357 aa)    
Predicted Functional Partners:
D7EJU2_TRICA
Reverse transcriptase domain-containing protein.
 
     0.893
GLEAN_10738
Integrase catalytic domain-containing protein.
  
  
  0.638
D2CG66_TRICA
Retrovirus-related Pol polyprotein from transposon 17.6-like Protein.
 
     0.562
D7EHW4_TRICA
Reverse transcriptase domain-containing protein.
 
     0.487
D7EKC6_TRICA
Integrase catalytic domain-containing protein.
  
  
 
0.481
D7EKJ9_TRICA
Uncharacterized protein.
  
  
 
0.477
A0A139W8S4
Retrovirus-related Pol polyprotein from transposon 17.6-like Protein.
  
  
 
0.470
A0A139W8U7
Uncharacterized protein.
  
  
 
0.469
A0A139WAI2
Uncharacterized protein.
  
  
 
0.469
D7EM19_TRICA
Transposon Tf2-9 polyprotein-like Protein.
  
  
 
0.466
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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