STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCU68_04330Unannotated protein; Belongs to the IUNH family. (342 aa)    
Predicted Functional Partners:
rbsK
Unannotated protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 
 0.941
rbsD
Unannotated protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
     
 0.748
CCU68_20080
Unannotated protein; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.
 
 0.731
guaD
Unannotated protein; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
  
 0.694
CCU68_30865
Unannotated protein; Belongs to the carbohydrate kinase PfkB family.
 
 
 0.693
xdhB
Unannotated protein.
   
  0.687
CCU68_01375
Unannotated protein.
  
  
 0.682
CCU68_08230
Unannotated protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
    
   0.668
CCU68_08185
Unannotated protein.
    
   0.668
CCU68_23750
Unannotated protein.
     
 0.668
Your Current Organism:
Pseudomonas gingeri
NCBI taxonomy Id: 707248
Other names: P. gingeri NCPPB 3146 = LMG 5327, Pseudomonas gingeri CFBP 2810, Pseudomonas gingeri LMG 5327, Pseudomonas gingeri LMG 5327 = NCPPB 3146, Pseudomonas gingeri NCPPB 3146, Pseudomonas gingeri NCPPB 3146 = LMG 5327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.