STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tauBUnannotated protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. (262 aa)    
Predicted Functional Partners:
tauA
Unannotated protein.
 
 
 0.999
CMV24_18665
Unannotated protein.
 
 0.998
RK21_05326
Unannotated protein.
 
 
  0.984
GCA_000688275_02293
Unannotated protein.
 
  
 0.917
RK21_05267
Unannotated protein.
 
  
 0.916
ssuC
Unannotated protein.
 
  
 0.876
CMV24_29725
Unannotated protein.
  
 0.833
CMV24_18695
Unannotated protein.
  
 0.664
CMV24_07810
Unannotated protein.
    0.641
GCA_000688275_02292
Unannotated protein.
 
  
 0.600
Your Current Organism:
Pseudomonas plecoglossicida
NCBI taxonomy Id: 1215115
Other names: P. plecoglossicida NBRC 103162 = DSM 15088, Pseudomonas plecoglossicida DSM 15088, Pseudomonas plecoglossicida DSM 15088 = NBRC 103162, Pseudomonas plecoglossicida NBRC 103162, Pseudomonas plecoglossicida NBRC 103162 = DSM 15088
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.