STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livH_2High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family. (322 aa)    
Predicted Functional Partners:
AQS52458.1
Leu/Ile/Val-binding protein homolog 3.
 
 
 0.999
livH_1
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
lptB
Lipopolysaccharide export system ATP-binding protein LptB.
 
 0.999
livF
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
 
 0.999
artM_3
Arginine transport ATP-binding protein ArtM.
 
    
 0.907
rbsA_2
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
    
 0.905
rbsA_1
Ribose import ATP-binding protein RbsA.
    
 0.904
artM_2
Arginine transport ATP-binding protein ArtM.
 
    
 0.899
drrA_1
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
      0.899
mglA_2
Galactose/methyl galactoside import ATP-binding protein MglA.
 
      0.885
Your Current Organism:
Jeotgalibaca dankookensis
NCBI taxonomy Id: 708126
Other names: J. dankookensis, JCM 19215, Jeotgalibaca dankookensis Lee et al. 2014, KCCM 90229, Trichococcus sp. EX-07, strain EX-07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.