STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS52523.1Hypothetical protein. (70 aa)    
Predicted Functional Partners:
AQS52522.1
Hypothetical protein.
 
     0.915
AQS52526.1
Hypothetical protein.
 
    0.885
AQS52525.1
Hypothetical protein.
 
     0.882
AQS52528.1
Hypothetical protein.
 
  
 0.857
AQS52518.1
Hypothetical protein.
 
    0.815
AQS52535.1
Hypothetical protein.
 
    0.801
AQS52542.1
Hypothetical protein.
 
     0.797
AQS52517.1
Hypothetical protein.
 
    0.773
dpnA
Modification methylase DpnIIB; Belongs to the N(4)/N(6)-methyltransferase family.
 
    0.765
clpP_1
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
 
    0.746
Your Current Organism:
Jeotgalibaca dankookensis
NCBI taxonomy Id: 708126
Other names: J. dankookensis, JCM 19215, Jeotgalibaca dankookensis Lee et al. 2014, KCCM 90229, Trichococcus sp. EX-07, strain EX-07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.