Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQS53264.1 | arcA | BW727_100871 | BW727_100873 | Hypothetical protein. | Arginine deiminase. | 0.612 |
| AQS53264.1 | arcB_2 | BW727_100871 | BW727_100872 | Hypothetical protein. | Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.607 |
| AQS53264.1 | arcC1 | BW727_100871 | BW727_101519 | Hypothetical protein. | Carbamate kinase 1; Belongs to the carbamate kinase family. | 0.629 |
| AQS54348.1 | arcB_2 | BW727_102034 | BW727_100872 | Hypothetical protein. | Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.488 |
| aaxC | arcA | BW727_100865 | BW727_100873 | Arginine/agmatine antiporter. | Arginine deiminase. | 0.794 |
| aaxC | arcB_2 | BW727_100865 | BW727_100872 | Arginine/agmatine antiporter. | Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.608 |
| aaxC | arcC1 | BW727_100865 | BW727_101519 | Arginine/agmatine antiporter. | Carbamate kinase 1; Belongs to the carbamate kinase family. | 0.599 |
| arcA | AQS53264.1 | BW727_100873 | BW727_100871 | Arginine deiminase. | Hypothetical protein. | 0.612 |
| arcA | aaxC | BW727_100873 | BW727_100865 | Arginine deiminase. | Arginine/agmatine antiporter. | 0.794 |
| arcA | arcB_2 | BW727_100873 | BW727_100872 | Arginine deiminase. | Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.999 |
| arcA | arcC1 | BW727_100873 | BW727_101519 | Arginine deiminase. | Carbamate kinase 1; Belongs to the carbamate kinase family. | 0.950 |
| arcA | metG_1 | BW727_100873 | BW727_100874 | Arginine deiminase. | Methionine--tRNA ligase. | 0.522 |
| arcB_2 | AQS53264.1 | BW727_100872 | BW727_100871 | Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Hypothetical protein. | 0.607 |
| arcB_2 | AQS54348.1 | BW727_100872 | BW727_102034 | Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Hypothetical protein. | 0.488 |
| arcB_2 | aaxC | BW727_100872 | BW727_100865 | Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginine/agmatine antiporter. | 0.608 |
| arcB_2 | arcA | BW727_100872 | BW727_100873 | Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginine deiminase. | 0.999 |
| arcB_2 | arcC1 | BW727_100872 | BW727_101519 | Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Carbamate kinase 1; Belongs to the carbamate kinase family. | 0.991 |
| arcB_2 | cinA | BW727_100872 | BW727_100623 | Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Putative competence-damage inducible protein; Belongs to the CinA family. | 0.541 |
| arcB_2 | lysX | BW727_100872 | BW727_100232 | Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Alpha-aminoadipate--LysW ligase LysX. | 0.914 |
| arcB_2 | metG_1 | BW727_100872 | BW727_100874 | Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Methionine--tRNA ligase. | 0.520 |
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