STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
manX_3PTS system mannose-specific EIIAB component. (163 aa)    
Predicted Functional Partners:
manZ_2
Mannose permease IID component.
 
 0.996
manY
Mannose permease IIC component.
 
 0.996
manX_2
PTS system mannose-specific EIIAB component.
 
 
0.988
manX_4
PTS system mannose-specific EIIAB component.
 
 
 0.988
ptsH
Phosphocarrier protein HPr.
  
 0.944
yvyI
Putative mannose-6-phosphate isomerase YvyI; Belongs to the mannose-6-phosphate isomerase type 1 family.
    
 0.926
manZ_1
Mannose permease IID component.
 
 
 0.907
manX_1
PTS system mannose-specific EIIAB component.
 
  
 0.906
agaC_1
N-acetylgalactosamine permease IIC component 1.
 
 
 0.903
manZ_3
Mannose permease IID component.
 
 
 0.849
Your Current Organism:
Jeotgalibaca dankookensis
NCBI taxonomy Id: 708126
Other names: J. dankookensis, JCM 19215, Jeotgalibaca dankookensis Lee et al. 2014, KCCM 90229, Trichococcus sp. EX-07, strain EX-07
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