STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amySAlpha-amylase. (496 aa)    
Predicted Functional Partners:
amyX
Pullulanase; Belongs to the glycosyl hydrolase 13 family.
 
 0.963
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.938
glgP
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.937
malP
Maltose phosphorylase.
  
 
 0.921
malL
Oligo-1,6-glucosidase.
     
 0.901
bglF
PTS system beta-glucoside-specific EIIBCA component.
  
  
 0.666
ptsG_2
PTS system glucose-specific EIICBA component.
  
  
 0.666
aaxC
Arginine/agmatine antiporter.
   
 0.527
steT_1
Serine/threonine exchanger SteT.
   
 0.527
steT_2
Serine/threonine exchanger SteT.
   
 0.527
Your Current Organism:
Jeotgalibaca dankookensis
NCBI taxonomy Id: 708126
Other names: J. dankookensis, JCM 19215, Jeotgalibaca dankookensis Lee et al. 2014, KCCM 90229, Trichococcus sp. EX-07, strain EX-07
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