STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cssRTranscriptional regulatory protein CssR. (216 aa)    
Predicted Functional Partners:
cssS
Sensor histidine kinase CssS.
 0.997
phoR_2
Alkaline phosphatase synthesis sensor protein PhoR.
 
 0.868
baeS
Signal transduction histidine-protein kinase BaeS.
 
 0.856
resE_1
Sensor histidine kinase ResE.
 
 
 0.850
resE_2
Sensor histidine kinase ResE.
 
 0.740
arlS
Signal transduction histidine-protein kinase ArlS.
 
 0.737
phoR_1
Alkaline phosphatase synthesis sensor protein PhoR.
 
 0.701
AQS54237.1
Hypothetical protein.
       0.678
yycG
Sensor histidine kinase YycG.
 
 0.675
cheY
Chemotaxis protein CheY.
  
   
 0.586
Your Current Organism:
Jeotgalibaca dankookensis
NCBI taxonomy Id: 708126
Other names: J. dankookensis, JCM 19215, Jeotgalibaca dankookensis Lee et al. 2014, KCCM 90229, Trichococcus sp. EX-07, strain EX-07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.