STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001748245_00138Unannotated protein. (341 aa)    
Predicted Functional Partners:
GCA_001748245_00135
Unannotated protein.
  
 
 0.935
GCA_001748245_00602
Unannotated protein.
  
  
 0.924
GCA_001748245_02457
Unannotated protein.
  
  
 0.924
GCA_001748245_01381
Unannotated protein.
  
 
 0.908
GCA_001748245_02417
Unannotated protein.
   
 
 0.908
GCA_001748245_00116
Unannotated protein.
  
0.907
GCA_001748245_00119
Unannotated protein.
  
0.907
GCA_001748245_00167
Unannotated protein.
  
 0.907
GCA_001748245_00240
Unannotated protein.
  
 0.907
GCA_001748245_00289
Unannotated protein.
  
0.907
Your Current Organism:
Oligoflexus tunisiensis
NCBI taxonomy Id: 708132
Other names: JCM 16864, NCIMB 14846, O. tunisiensis, Oligoflexus tunisiensis Nakai et al. 2014, bacterium Shr3, strain Shr3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.