STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001748245_00216Unannotated protein. (345 aa)    
Predicted Functional Partners:
GCA_001748245_00215
Unannotated protein.
 
 0.988
GCA_001748245_05060
Unannotated protein.
  
 0.956
GCA_001748245_03428
Unannotated protein.
  
 
 0.946
GCA_001748245_04338
Unannotated protein.
  
 
 0.946
GCA_001748245_06306
Unannotated protein.
  
 0.933
GCA_001748245_01352
Unannotated protein.
  
 
 0.915
GCA_001748245_00775
Unannotated protein.
   
   0.906
GCA_001748245_00831
Unannotated protein.
   
   0.906
GCA_001748245_00327
Unannotated protein.
 
 
 0.900
GCA_001748245_01310
Unannotated protein.
  
 0.900
Your Current Organism:
Oligoflexus tunisiensis
NCBI taxonomy Id: 708132
Other names: JCM 16864, NCIMB 14846, O. tunisiensis, Oligoflexus tunisiensis Nakai et al. 2014, bacterium Shr3, strain Shr3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.