STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001748245_05841Unannotated protein. (480 aa)    
Predicted Functional Partners:
GCA_001748245_06040
Unannotated protein.
   
 
 0.927
GCA_001748245_06182
Unannotated protein.
  
 
 0.924
GCA_001748245_06183
Unannotated protein.
   
   0.922
GCA_001748245_05991
Unannotated protein.
    
 
 0.920
GCA_001748245_06193
Unannotated protein.
    
 
 0.919
GCA_001748245_05989
Unannotated protein.
    
 
 0.918
GCA_001748245_06176
Unannotated protein.
    
 
 0.917
GCA_001748245_06158
Unannotated protein.
   
   0.915
GCA_001748245_06171
Unannotated protein.
    
 
 0.915
GCA_001748245_00592
Unannotated protein.
   
   0.914
Your Current Organism:
Oligoflexus tunisiensis
NCBI taxonomy Id: 708132
Other names: JCM 16864, NCIMB 14846, O. tunisiensis, Oligoflexus tunisiensis Nakai et al. 2014, bacterium Shr3, strain Shr3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.