STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCHL11_09961Uncharacterized protein. (403 aa)    
Predicted Functional Partners:
CCHL11_05783
Putative RING finger protein P8B7.15c.
    
 0.980
CCHL11_03598
Endoribonuclease YSH1.
    
 
 0.877
CCHL11_10215
Ubiquitin-conjugating enzyme E2-20 kDa.
    
 
 0.625
CCHL11_09145
Cleavage and polyadenylation specificity factor subunit 2.
    
 
 0.544
CCHL11_01929
Putative ATP-dependent helicase C17A2.12-like protein 1.
 
      0.493
CCHL11_01993
DNA cross-link repair protein pso2/snm1.
    
 
 0.458
CCHL11_04446
Protein artemis.
    
 
 0.458
Your Current Organism:
Colletotrichum chlorophyti
NCBI taxonomy Id: 708187
Other names: C. chlorophyti, Colletotrichum chlorophytumi, IMI 103806
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.