STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCHL11_10322Mitochondrial translation optimization protein 1. (650 aa)    
Predicted Functional Partners:
CCHL11_10323
Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family.
 
      0.717
CCHL11_05773
Methionyl-tRNA formyltransferase, mitochondrial.
  
  
 0.546
CCHL11_01584
Mitochondrial inner membrane protein oxa1-1.
  
  
 0.521
CCHL11_07942
Mitochondrial inner membrane protein OXA1.
  
  
 0.521
CCHL11_04586
Cysteine-tRNA ligase.
  
  
 0.519
CCHL11_05567
Pumilio-like protein 2.
    
   0.493
CCHL11_02724
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
      
 0.457
CCHL11_03100
tRNA pseudouridine synthase 1.
      
 0.456
uba4
Adenylyltransferase and sulfurtransferase uba4; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers urm1 and MOCS2A. Its N-terminus first activates urm1 and MOCS2A as acyl- adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to urm1 and MOCS2A to form thiocarboxylation (- COSH) of their C-terminus. The reaction probably involves hydrogen sulfide [...]
      
 0.454
CCHL11_05501
MARVEL domain-containing protein.
     
 0.448
Your Current Organism:
Colletotrichum chlorophyti
NCBI taxonomy Id: 708187
Other names: C. chlorophyti, Colletotrichum chlorophytumi, IMI 103806
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