STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCHL11_08701Alkaline ceramidase YPC1. (269 aa)    
Predicted Functional Partners:
CCHL11_09048
Sphingosine N-acyltransferase LAG1-like protein 2.
    
 0.870
CCHL11_05655
Sphingosine N-acyltransferase lac1.
    
 0.870
CCHL11_00826
Sphingosine N-acyltransferase lag1-like protein 1.
    
 0.870
CCHL11_00048
Sphingoid long chain base kinase 5.
    
 0.859
CCHL11_04402
Neutral ceramidase.
    
 0.843
CCHL11_06410
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
   
 
 0.834
CCHL11_03789
Dihydrosphingosine 1-phosphate phosphatase.
     
 0.827
CCHL11_09191
Sphingolipid C4-hydroxylase SUR2; Belongs to the sterol desaturase family.
     
 0.826
CCHL11_00549
3-ketodihydrosphingosine reductase gsl-3.
     
 0.803
CCHL11_05855
Neutral ceramidase.
    
 0.799
Your Current Organism:
Colletotrichum chlorophyti
NCBI taxonomy Id: 708187
Other names: C. chlorophyti, Colletotrichum chlorophytumi, IMI 103806
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