STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCHL11_02006Protein DSF2. (725 aa)    
Predicted Functional Partners:
CCHL11_01584
Mitochondrial inner membrane protein oxa1-1.
  
  
 0.521
CCHL11_07942
Mitochondrial inner membrane protein OXA1.
  
  
 0.521
CCHL11_10399
Protein SKT5.
  
   0.482
CCHL11_04040
Queuine tRNA-ribosyltransferase accessory subunit 2; Non-catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine); Belongs to the queuine tRNA-ribosyltransferase family. QTRT2 subfamily.
   
 
 0.471
CCHL11_05302
Chitin synthase regulatory factor 3.
  
   0.469
CCHL11_02724
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
      
 0.457
CCHL11_05501
MARVEL domain-containing protein.
     
 0.448
CCHL11_08385
D-amino-acid oxidase 2.
     
 0.448
CCHL11_05973
Uncharacterized protein.
     
 0.448
CCHL11_06312
L-pipecolate oxidase 9.
     
 0.448
Your Current Organism:
Colletotrichum chlorophyti
NCBI taxonomy Id: 708187
Other names: C. chlorophyti, Colletotrichum chlorophytumi, IMI 103806
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