STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CT0861_01298Uncharacterized protein. (267 aa)    
Predicted Functional Partners:
CT0861_03547
Signal peptidase complex (Microsomal signal peptidase 25 kDa subunit).
   
 0.948
CT0861_01881
Microsomal signal peptidase 12kDa subunit.
   
 0.928
CT0861_06742
Signal peptidase subunit 3.
   
 0.924
cyn1
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.871
CT0861_10757
Vacuolar membrane-associated protein iml-1.
    
 0.727
CT0861_09661
WD repeat-containing protein.
    
 0.698
CT0861_12295
WD repeat-containing protein.
    
 0.696
CT0861_00304
Tumor suppressor candidate 4 (Nitrogen permease regulator 2).
    
 0.683
GUF1
Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.
  
 
 0.587
CT0861_06002
Uncharacterized protein.
   
 0.537
Your Current Organism:
Colletotrichum tofieldiae
NCBI taxonomy Id: 708197
Other names: C. tofieldiae, Colletotrichum dematium var. minus, Colletotrichum tofieldiae (Pat.) Damm, P.F. Cannon & Crous 2009, Vermicularia tofieldiae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.