STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CT0861_04302Uncharacterized protein. (420 aa)    
Predicted Functional Partners:
CT0861_11838
ASH2-trithorax family protein.
    
 0.936
CT0861_11408
WD domain-containing protein.
    
 0.923
CT0861_12581
Nuclear pore glycoprotein p62.
   
  0.823
CT0861_00481
CTD kinase subunit gamma.
    
   0.809
CT0861_08962
Low temperature requirement A protein.
   
 0.805
CT0861_07437
Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones.
    
 0.731
CT0861_11882
Histone H2B; Belongs to the histone H2B family.
    
 0.696
CT0861_12976
WD domain-containing protein.
   
 0.692
CT0861_11327
Histone H2A; Belongs to the histone H2A family.
   
 0.668
CT0861_07065
Histone H3.
    
 0.660
Your Current Organism:
Colletotrichum tofieldiae
NCBI taxonomy Id: 708197
Other names: C. tofieldiae, Colletotrichum dematium var. minus, Colletotrichum tofieldiae (Pat.) Damm, P.F. Cannon & Crous 2009, Vermicularia tofieldiae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.