Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CT0861_02413BZIP transcription factor. (384 aa)    
Predicted Functional Partners:
CT0861_02472
WD domain-containing protein.
   
 
 0.976
CT0861_02030
60S ribosomal protein L5.
   
   0.968
CT0861_10607
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.967
CT0861_04817
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
   0.965
CT0861_05652
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.959
CT0861_00609
60S ribosomal protein L31.
   
 
 0.957
CT0861_01267
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
   0.956
CT0861_10979
60S ribosomal protein L25.
   
   0.954
CT0861_09333
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.953
CT0861_08326
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 
 0.950
Your Current Organism:
Colletotrichum tofieldiae
NCBI taxonomy Id: 708197
Other names: C. tofieldiae, Colletotrichum dematium var. minus, Colletotrichum tofieldiae (Pat.) Damm, P.F. Cannon & Crous 2009, Vermicularia tofieldiae
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