Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CT0861_00519Pectate lyase catalytic (Pep1). (120 aa)    
Predicted Functional Partners:
CT0861_05342
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
    
 0.500
CT0861_03912
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.489
CT0861_13094
Ankyrin repeat domain-containing protein 28.
    
  0.477
CT0861_11646
Phosphatidylinositol transfer protein sfh5.
    
  0.426
CT0861_06334
Sec14 cytosolic factor (CRAL/TRIO domain-containing protein).
    
  0.426
CT0861_11439
Sec14 cytosolic factor.
    
  0.426
CT0861_00736
DUF1776-domain-containing protein.
     
 0.407
CT0861_08589
Diacylglycerol O-acyltransferase 2B.
     
 0.407
CT0861_06927
Xanthine dehydrogenase.
     
  0.406
CT0861_08041
Phytoene dehydrogenase (Phytoene desaturase).
     
  0.406
Your Current Organism:
Colletotrichum tofieldiae
NCBI taxonomy Id: 708197
Other names: C. tofieldiae, Colletotrichum dematium var. minus, Colletotrichum tofieldiae (Pat.) Damm, P.F. Cannon & Crous 2009, Vermicularia tofieldiae
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.