Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CT0861_11798Cupin 2 conserved barrel domain protein. (167 aa)    
Predicted Functional Partners:
CT0861_12581
Nuclear pore glycoprotein p62.
    
  0.810
CT0861_08217
Glucosidase 2 subunit beta.
   
 0.675
CT0861_09241
1,4-alpha-glucan-branching enzyme (Alpha amylase).
   
 0.646
CT0861_01838
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
 0.635
CT0861_04005
Starch binding domain-containing protein.
   
 
 0.630
CT0861_02334
Glycoside hydrolase family 32 protein; Belongs to the glycosyl hydrolase 32 family.
     
 0.605
CT0861_06102
Glycogen debranching enzyme.
    
 0.585
CT0861_09324
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
    
 0.582
CT0861_07399
Elongation factor Tu GTP binding domain-containing protein.
   
 
  0.527
CT0861_04229
Calnexin (Calreticulin family protein).
    
 0.491
Your Current Organism:
Colletotrichum tofieldiae
NCBI taxonomy Id: 708197
Other names: C. tofieldiae, Colletotrichum dematium var. minus, Colletotrichum tofieldiae (Pat.) Damm, P.F. Cannon & Crous 2009, Vermicularia tofieldiae
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