Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CT0861_08633Uncharacterized protein. (671 aa)    
Predicted Functional Partners:
CT0861_09116
SET domain-containing protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
   
 0.840
CT0861_10073
SET domain-containing protein.
   
 0.717
CT0861_04135
Mitochondrial 40S ribosomal protein Mrp2 (Ribosomal protein S14p/S29e).
   
 
 0.682
CT0861_12211
Mitochondrial large ribosomal subunit; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.665
CT0861_09946
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.663
CT0861_11376
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.663
CT0861_03755
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.663
CT0861_06744
Histone acetyltransferase type b subunit 2.
    
 
 0.648
CT0861_03378
S4 domain-containing protein.
    
 
 0.640
CT0861_09291
Deacetylase complex subunit.
    
 
 0.638
Your Current Organism:
Colletotrichum tofieldiae
NCBI taxonomy Id: 708197
Other names: C. tofieldiae, Colletotrichum dematium var. minus, Colletotrichum tofieldiae (Pat.) Damm, P.F. Cannon & Crous 2009, Vermicularia tofieldiae
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