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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CT0861_00749Dienelactone hydrolase. (261 aa)    
Predicted Functional Partners:
CT0861_05629
Maleylacetate (Iron-containing alcohol dehydrogenase).
  
 
 0.530
CT0861_01464
Uncharacterized protein.
  
 
 0.530
CT0861_07906
Iron-containing alcohol dehydrogenase.
  
 
 0.530
CT0861_09296
Dienelactone hydrolase.
     
 0.508
CT0861_03525
Cyclopentanone 1,2-monooxygenase.
   
  
 0.469
CT0861_11570
3-hydroxybutyryl-dehydrogenase.
   
 
  0.442
CT0861_08717
3-hydroxybutyryl-CoA dehydrogenase.
   
 
  0.442
CT0861_04822
3-hydroxyacyl-CoA dehydrogenase.
   
 
  0.442
CT0861_06332
Integral membrane protein.
   
 
  0.439
CT0861_03819
3-hydroxyacyl-dehydrogenase.
   
 
  0.439
Your Current Organism:
Colletotrichum tofieldiae
NCBI taxonomy Id: 708197
Other names: C. tofieldiae, Colletotrichum dematium var. minus, Colletotrichum tofieldiae (Pat.) Damm, P.F. Cannon & Crous 2009, Vermicularia tofieldiae
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