STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CT0861_11610Tyrosine-protein phosphatase non-receptor type 6. (562 aa)    
Predicted Functional Partners:
CT0861_10041
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.640
CT0861_03090
Nitrate reductase.
    
 0.640
CT0861_07876
Tryptophan synthase.
    
  0.605
CT0861_02999
Polyketide synthase.
   
  0.568
CT0861_07189
3'-5' exonuclease.
    
  0.559
CT0861_09671
Sterigmatocystin 8-O-methyltransferase.
     
 0.490
CT0861_02789
Sterigmatocystin 8-O-methyltransferase.
     
 0.490
CT0861_05476
O-methyltransferase.
     
 0.490
CT0861_03916
Epoxide hydrolase.
   
  0.488
CT0861_07230
Epoxide hydrolase 2.
   
  0.488
Your Current Organism:
Colletotrichum tofieldiae
NCBI taxonomy Id: 708197
Other names: C. tofieldiae, Colletotrichum dematium var. minus, Colletotrichum tofieldiae (Pat.) Damm, P.F. Cannon & Crous 2009, Vermicularia tofieldiae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.