STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CT0861_11611Regulatory protein Cys-3. (301 aa)    
Predicted Functional Partners:
CT0861_02979
Sulfur controller 2 (Sulfur metabolite repression control protein).
    
 
 0.981
CT0861_00657
Cytochrome c oxidase polypeptide Vi.
   
 0.942
CT0861_00725
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.925
CT0861_09255
Cytochrome C oxidase polypeptide V.
   
 0.915
CT0861_07935
Oxidoreductase-like protein.
   
 0.912
CT0861_04539
Cytochrome-c oxidase chain VIIc.
   
 0.909
CT0861_10927
Acyl-CoA thioesterase II.
   
 0.853
CT0861_10926
Cytochrome C oxidase polypeptide IV.
   
 0.853
CT0861_12534
Glycogen synthase kinase; Belongs to the protein kinase superfamily.
    
 0.795
CT0861_08246
Cross-pathway control protein 1 (BZIP transcription factor).
    
 0.747
Your Current Organism:
Colletotrichum tofieldiae
NCBI taxonomy Id: 708197
Other names: C. tofieldiae, Colletotrichum dematium var. minus, Colletotrichum tofieldiae (Pat.) Damm, P.F. Cannon & Crous 2009, Vermicularia tofieldiae
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