STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CT0861_08052MAGE family protein. (311 aa)    
Predicted Functional Partners:
CT0861_11720
Structural maintenance of chromosomes 5 smc5.
   
 0.999
CT0861_04499
RecF/RecN/SMC N terminal domain-containing protein (DNA repair protein Rad18).
   
 0.999
CT0861_07478
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.999
CT0861_11831
DNA repair protein.
   
 0.999
CT0861_02143
Chromosomal organization and DNA repair protein.
    
 0.999
CT0861_10212
Structural maintenance of chromosomes protein.
    
 0.838
CT0861_04192
Structural maintenance of chromosomes protein.
   
 0.778
CT0861_12728
Uncharacterized protein.
   
 0.778
CT0861_04389
Structural maintenance of chromosomes protein.
    
 0.761
CT0861_10597
Structural maintenance of chromosomes protein.
    
 0.754
Your Current Organism:
Colletotrichum tofieldiae
NCBI taxonomy Id: 708197
Other names: C. tofieldiae, Colletotrichum dematium var. minus, Colletotrichum tofieldiae (Pat.) Damm, P.F. Cannon & Crous 2009, Vermicularia tofieldiae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.