STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA264_07285Unannotated protein; Belongs to the glycosyl hydrolase 13 family. (618 aa)    
Predicted Functional Partners:
CA264_09565
Unannotated protein.
   
 0.780
CA264_09570
Unannotated protein.
   
 0.780
CA264_12800
Unannotated protein.
   
 0.780
CA264_11145
Unannotated protein.
 
 
0.737
CA264_09040
Unannotated protein.
 
  
 0.721
CA264_09035
Unannotated protein.
 
  
 0.686
CA264_09045
Unannotated protein.
  
     0.682
CA264_13055
Unannotated protein.
 
   
 0.679
CA264_12540
Unannotated protein.
  
  
 0.578
CA264_07280
Unannotated protein.
   
   0.495
Your Current Organism:
Pontibacter actiniarum
NCBI taxonomy Id: 709015
Other names: P. actiniarum DSM 19842, Pontibacter actiniarum DSM 19842, Pontibacter actiniarum KMM 6156, Pontibacter actiniarum str. DSM 19842, Pontibacter actiniarum strain DSM 19842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.