STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR32729.1COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006686: IPR006685; KEGG: cff:CFF8240_0390 MscS mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: MscS Mechanosensitive ion channel; PFAM: Mechanosensitive ion channel; Conserved TM helix. (273 aa)    
Predicted Functional Partners:
ADR32730.1
COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: sun:SUN_0921 NAD(P)H-flavin oxidoreductase; PFAM: nitroreductase; SPTR: NAD(P)H-flavin oxidoreductase; PFAM: Nitroreductase family.
  
    0.761
ADR32731.1
Hypothetical protein; InterPro IPR000209; KEGG: tdn:Suden_0048 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF309).
       0.581
ADR32732.1
KEGG: tdn:Suden_0049 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.561
ADR32733.1
Helicase domain protein; COGs: COG1204 Superfamily II helicase; InterPro IPR014021: IPR001650: IPR014001; KEGG: tdn:Suden_1967 helicase-like; PFAM: helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; SPTR: Helicase-like protein; PFAM: Helicase conserved C-terminal domain; Mitochondrial degradasome RNA helicase subunit C terminal.
       0.412
Your Current Organism:
Sulfuricurvum kujiense
NCBI taxonomy Id: 709032
Other names: S. kujiense DSM 16994, Sulfuricurvum kujiense DSM 16994, Sulfuricurvum kujiense YK-1, Sulfuricurvum kujiense str. DSM 16994, Sulfuricurvum kujiense strain DSM 16994
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