STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR32885.1Uncharacterized protein family UPF0102; COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; InterPro IPR003509; KEGG: ant:Arnit_2816 hypothetical protein; PFAM: Uncharacterised protein family UPF0102; SPTR: UPF0102 protein Arnit_2816; PFAM: Uncharacterised protein family UPF0102. (111 aa)    
Predicted Functional Partners:
ADR32884.1
Molybdopterin oxidoreductase; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterPro IPR006655: IPR006963: IPR006656: IPR006657; KEGG: nis:NIS_1552 formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; SPTR: Formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.787
ADR32883.1
Short-chain dehydrogenase/reductase SDR; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR020904: IPR002347: IPR002198; KEGG: tdn:Suden_1903 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase.
       0.689
ADR32881.1
KEGG: ant:Arnit_1835 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.506
ADR32882.1
COGs: COG2996 conserved hypothetical protein; InterPro IPR014464; KEGG: tdn:Suden_0312 hypothetical protein; SPTR: Nucleic acid binding protein; Belongs to the CvfB family.
       0.506
ppnP
Protein of unknown function DUF1255; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
       0.453
ADR34173.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG2200 FOG: EAL domain; InterProIPR013702: IPR019494: IPR013655: IPR000160: IPR 001633: IPR000014: IPR000700: IPR001610; KEGG: pin:Ping_1203 sensor histidine kinase PAS domain-containing protein; PFAM: EAL domain protein; domain of unknown function DUF1745; FIST C domain; PAS fold-3 domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); [...]
   
    0.414
ADR33146.1
COGs: COG1868 Flagellar motor switch protein; InterPro IPR001689: IPR001543; KEGG: tdn:Suden_0707 flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; SPTR: Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM.
   
    0.408
ADR33376.1
Diguanylate cyclase/phosphodiesterase with GAF sensor; COGs: COG3899 ATPase; InterProIPR000719: IPR001633: IPR000160: IPR020635: IPR 002290: IPR019734: IPR003018: IPR017442; KEGG: npu:Npun_F2369 multi-sensor signal transduction multi-kinase; PFAM: EAL domain protein; Serine/threonine-protein kinase-like domain; GAF domain protein; GGDEF domain containing protein; SMART: EAL domain protein; serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Tetratricopeptide repeat; GAF domain protein; GGDEF domain containing protein; SPTR: Serine/threonine kinase with GAF domai [...]
  
    0.402
Your Current Organism:
Sulfuricurvum kujiense
NCBI taxonomy Id: 709032
Other names: S. kujiense DSM 16994, Sulfuricurvum kujiense DSM 16994, Sulfuricurvum kujiense YK-1, Sulfuricurvum kujiense str. DSM 16994, Sulfuricurvum kujiense strain DSM 16994
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