STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR32922.1Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004838: IPR001176: IPR004839; KEGG: dal:Dalk_0036 aminotransferase class I and II; PFAM: aminotransferase class I and II; SPTR: Aminotransferase class I and II; PFAM: Aminotransferase class I and II. (381 aa)    
Predicted Functional Partners:
ADR32928.1
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845: IPR000873; KEGG: wsu:WS0237 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: Serine O-acetyltransferase; PFAM: AMP-binding enzyme.
  
  
 0.682
ADR32921.1
KEGG: tdn:Suden_0794 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.678
ADR32927.1
Membrane protein involved in aromatic hydrocarbon degradation; COGs: COG2067 Long-chain fatty acid transport protein; InterPro IPR005017; KEGG: tdn:Suden_1834 hypothetical protein; PFAM: membrane protein involved in aromatic hydrocarbon degradation; SPTR: Membrane protein; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX).
     
 0.663
ADR32929.1
AAA ATPase central domain protein; COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003959: IPR003593; KEGG: tdn:Suden_1833 AAA ATPase; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: AAA ATPase; PFAM: ATPase family associated with various cellular activities (AAA).
  
    0.658
ADR32923.1
Hypothetical protein; KEGG: tkm:TK90_2821 type IV secretory pathway VirB4 components-like protein; SPTR: Type IV secretory pathway VirB4 components-like protein.
       0.655
ADR32924.1
Plasmid stabilization system; InterPro IPR007712; KEGG: tdn:Suden_0815 plasmid stabilization system protein; PFAM: plasmid stabilization system; SPTR: Plasmid stabilization system; PFAM: Plasmid stabilisation system protein.
       0.655
ADR32925.1
KAP P-loop domain protein; InterPro IPR011646; KEGG: plu:plu1827 hypothetical protein; PFAM: KAP P-loop domain protein; SPTR: Similarities with unknown protein; PFAM: KAP family P-loop domain.
       0.655
nfo
Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.
       0.655
ADR34447.1
NAD(P)H dehydrogenase (quinone); COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: abu:Abu_1058 flavodoxin-like fold domain-containing protein; PFAM: NAD(P)H dehydrogenase (quinone); SPTR: Flavodoxin-like fold domain protein, putative NADPH-quinone reductase; PFAM: Flavodoxin-like fold.
   
    0.589
ADR32919.1
COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: sun:SUN_1152 aldo/keto reductase-family protein; PFAM: aldo/keto reductase; SPTR: Aldo/keto reductase-family protein; PFAM: Aldo/keto reductase family.
     
 0.587
Your Current Organism:
Sulfuricurvum kujiense
NCBI taxonomy Id: 709032
Other names: S. kujiense DSM 16994, Sulfuricurvum kujiense DSM 16994, Sulfuricurvum kujiense YK-1, Sulfuricurvum kujiense str. DSM 16994, Sulfuricurvum kujiense strain DSM 16994
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