STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR33258.1Tail Collar domain protein; COGs: COG4675 Microcystin-dependent protein; InterPro IPR011083; KEGG: rpd:RPD_3002 phage tail collar; PFAM: Tail Collar domain protein; SPTR: Phage Tail Collar; PFAM: Phage Tail Collar Domain. (226 aa)    
Predicted Functional Partners:
ADR33259.1
Tail Collar domain protein; COGs: COG4675 Microcystin-dependent protein; InterPro IPR011083; KEGG: rpd:RPD_3002 phage tail collar; PFAM: Tail Collar domain protein; SPTR: Tail Collar domain protein; PFAM: Phage Tail Collar Domain.
 
    
0.678
ADR33256.1
Hemolysin-type calcium-binding region; InterPro IPR001343; KEGG: shw:Sputw3181_3687 fibronectin, type III domain-containing protein; PFAM: Hemolysin-type calcium-binding region; SPTR: Putative uncharacterized protein; PFAM: Hemolysin-type calcium-binding repeat (2 copies).
 
     0.670
ADR33257.1
Tail Collar domain protein; COGs: COG4675 Microcystin-dependent protein; InterPro IPR011083; KEGG: bgl:bglu_2g12580 phage tail collar; PFAM: Tail Collar domain protein; SPTR: Microcystin dependent protein; PFAM: Phage Tail Collar Domain.
 
    
0.668
ADR34725.1
Hypothetical protein; InterPro IPR018511: IPR018512: IPR001343; KEGG: pmn:PMN2A_0736 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
   0.511
ADR34438.1
Hemolysin-type calcium-binding region; InterPro IPR001343; KEGG: pme:NATL1_21051 hypothetical protein; PFAM: Hemolysin-type calcium-binding region; SPTR: Putative uncharacterized protein.
   
   0.413
ADR34762.1
Hypothetical protein; KEGG: sit:TM1040_3847 peptidase S8/S53 subtilisin kexin sedolisin; SPTR: Peptidase S8 and S53 subtilisin kexin sedolisin.
   
   0.413
Your Current Organism:
Sulfuricurvum kujiense
NCBI taxonomy Id: 709032
Other names: S. kujiense DSM 16994, Sulfuricurvum kujiense DSM 16994, Sulfuricurvum kujiense YK-1, Sulfuricurvum kujiense str. DSM 16994, Sulfuricurvum kujiense strain DSM 16994
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