STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR33740.1Phosphoesterase HXTX; COGs: COG1514 2'-5' RNA ligase; InterPro IPR014051; KEGG: sun:SUN_0160 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; SPTR: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase. (168 aa)    
Predicted Functional Partners:
ADR33739.1
Protein of unknown function DUF980; COGs: COG3228 conserved hypothetical protein; InterPro IPR010384; KEGG: sun:SUN_1033 hypothetical protein; PFAM: protein of unknown function DUF980; SPTR: Putative uncharacterized protein; PFAM: Phosphoenolpyruvate:glucose-phosphotransferase regulator; Belongs to the MtfA family.
       0.773
ADR33741.1
DUF234 DEXX-box ATPase; InterPro IPR004256; KEGG: tdn:Suden_0136 hypothetical protein; PFAM: DUF234 DEXX-box ATPase; SPTR: Dexx-box atpase; PFAM: Archaea bacterial proteins of unknown function.
       0.768
ADR33743.1
Endonuclease/exonuclease/phosphatase; COGs: COG3021 conserved hypothetical protein; InterPro IPR005135; KEGG: tdn:Suden_1157 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/Exonuclease/phosphatase family.
     
 0.551
ADR33742.1
Phospholipase D/Transphosphatidylase; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: pin:Ping_2455 phospholipase D/transphosphatidylase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; SPTR: Phospholipase D/Transphosphatidylase.
       0.550
bioD
Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
  
  
 0.464
Your Current Organism:
Sulfuricurvum kujiense
NCBI taxonomy Id: 709032
Other names: S. kujiense DSM 16994, Sulfuricurvum kujiense DSM 16994, Sulfuricurvum kujiense YK-1, Sulfuricurvum kujiense str. DSM 16994, Sulfuricurvum kujiense strain DSM 16994
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