STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR33836.1KEGG: tdn:Suden_1249 hypothetical protein; SPTR: Putative uncharacterized protein. (198 aa)    
Predicted Functional Partners:
ADR33837.1
KEGG: tdn:Suden_1248 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.791
ADR33838.1
COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107: IPR002104; KEGG: tdn:Suden_1247 phage integrase; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Tyrosine recombinase XerD subunit; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family.
       0.789
ADR33840.1
Putative transcriptional acitvator, Baf family; COGs: COG1521 Putative transcriptional regulator protein; InterPro IPR004619; KEGG: tdn:Suden_0888 pantothenate kinase; PFAM: Bvg accessory factor; SPTR: Type III pantothenate kinase; TIGRFAM: transcriptional activator, Baf family; PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III.
       0.622
hisG
ATP phosphoribosyltransferase (homohexameric); Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.
       0.622
ADR33833.1
Twitching motility protein; COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR001482: IPR006321: IPR003593; KEGG: nis:NIS_1175 twitching motility protein PilT; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: Twitching motility protein PilT; TIGRFAM: twitching motility protein; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT.
       0.582
gatC
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
       0.582
ADR33839.1
InterPro IPR013096; KEGG: sun:SUN_0910 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Putative uncharacterized protein; PFAM: Cupin domain.
       0.581
ADR33834.1
COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006660: IPR006504; KEGG: nam:NAMH_1593 arsenate reductase; PFAM: arsenate reductase and related; SPTR: Arsenate reductase; PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family; Belongs to the ArsC family.
       0.536
ADR33842.1
17 kDa surface antigen; COGs: COG3134 outer membrane lipoprotein; KEGG: sdl:Sdel_1639 17 kDa surface antigen; SPTR: 17 kDa surface antigen; PFAM: Rickettsia 17 kDa surface antigen.
       0.446
fur-2
Ferric uptake regulator, Fur family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: wsu:WS0545 peroxide stress regulator; PFAM: ferric-uptake regulator; SPTR: PEROXIDE STRESS REGULATOR; PFAM: Ferric uptake regulator family; Belongs to the Fur family.
       0.417
Your Current Organism:
Sulfuricurvum kujiense
NCBI taxonomy Id: 709032
Other names: S. kujiense DSM 16994, Sulfuricurvum kujiense DSM 16994, Sulfuricurvum kujiense YK-1, Sulfuricurvum kujiense str. DSM 16994, Sulfuricurvum kujiense strain DSM 16994
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