STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (315 aa)    
Predicted Functional Partners:
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
  
 0.970
ADR34814.1
Uncharacterized protein family UPF0093; COGs: COG1981 membrane protein; InterPro IPR005265; KEGG: tdn:Suden_0391 hypothetical protein; PFAM: Uncharacterised protein family UPF0093; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: conserved hypothetical integral membrane protein.
 
  
 0.943
ADR34034.1
COGs: COG2406 Protein distantly related to ferritins; InterPro IPR008331: IPR009040: IPR014490; KEGG: nis:NIS_1151 bacterioferritin; PFAM: Ferritin Dps family protein; SPTR: Bacterioferritin; PFAM: Ferritin-like domain.
     
  0.900
ADR34022.1
HAD-superfamily hydrolase, subfamily IA, variant 1; COGs: COG0546 phosphatase; InterPro IPR006439: IPR005834; KEGG: tdn:Suden_0919 HAD family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.
  
    0.776
ADR34021.1
KEGG: tdn:Suden_0920 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADR34019.1
COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR011701: IPR002123; KEGG: tdn:Suden_1182 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; SMART: phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; PFAM: Acyltransferase; Major Facilitator Superfamily; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.
     
 0.687
ADR34020.1
Protein of unknown function DUF1260; InterPro IPR009671; KEGG: tdn:Suden_1183 hypothetical protein; PFAM: protein of unknown function DUF1260; SPTR: Putative uncharacterized protein; PFAM: Family of unknown function (DUF695); Protein of unknown function (DUF1260).
       0.655
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
 
  
 0.632
ADR34054.1
Cytochrome c assembly protein; COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541; KEGG: tdn:Suden_0916 cytochrome c assembly protein; PFAM: cytochrome c assembly protein; SPTR: Cytochrome c biogenesis protein; PFAM: Cytochrome C assembly protein; ResB-like family; TIGRFAM: cytochrome c-type biogenesis protein CcsB.
  
  
 0.623
ADR34024.1
NLP/P60 protein; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: tdn:Suden_0091 NLP/P60; PFAM: NLP/P60 protein; SPTR: NLP/P60; PFAM: NlpC/P60 family.
       0.556
Your Current Organism:
Sulfuricurvum kujiense
NCBI taxonomy Id: 709032
Other names: S. kujiense DSM 16994, Sulfuricurvum kujiense DSM 16994, Sulfuricurvum kujiense YK-1, Sulfuricurvum kujiense str. DSM 16994, Sulfuricurvum kujiense strain DSM 16994
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